雅虎香港 搜尋

搜尋結果

1. www.rcsb.org › downloadsRCSB PDB Batch Download Service

   www.rcsb.org › downloads

   • 網頁紀錄

   Download Multiple Files from the PDB Archive. For downloading large amounts of data files, users are encouraged to use this shell script for batch download. Individual data files, including 3DEM maps and NMR NEF files, can also be downloaded from Structure Summary pages.

   • Ligands

     Ligands - RCSB PDB Batch Download Service

   • Sequences

     Sequences - RCSB PDB Batch Download Service

   • Batch Downloads With Shell Script

     Batch Downloads With Shell Script - RCSB PDB Batch ...

2. www.rcsb.orgRCSB PDB: Homepage

   www.rcsb.org

   • 網頁紀錄

   RCSB Protein Data Bank (RCSB PDB) enables breakthroughs in science and education by providing access and tools for exploration, visualization, and analysis of: Experimentally-determined 3D structures from the Protein Data Bank (PDB) archive. Computed Structure Models (CSM) from AlphaFold DB and ModelArchive.

   • 
   • 
   • 
   • 

3. 其他人也問了

   What is a PDB file?

   • These files are available in several formats (PDB, mmCIF, XML). A typical PDB formatted file includes a large "header" section of text that summarizes the protein, citation information, and the details of the structure solution, followed by the sequence and a long list of the atoms and their coordinates.

   PDB-101: Learn: Guide to Understanding PDB Data: PDB Overview

   pdb101.rcsb.org/learn/guide-to-understanding-pdb-data/pdb-overview

   查看此問題的所有搜尋結果

   How do I download a structure file for multiple PDB IDs?

   • Created by Maria Voigt (RCSB PDB). Structure files for multiple PDB ids can be downloaded in bulk via the provided RCSB PDB link. To obtain a list of ids from NAKB search, first navigate to the tabular report page, then click on the ↓Ids button to download the id list.

   Downloads - NAKB

   www.nakb.org/download.html

   查看此問題的所有搜尋結果

   What information is stored in the PDB archive?

   • The primary information stored in the PDB archive consists of coordinate files for biological molecules. These files list the atoms in each protein, and their 3D location in space. These files are available in several formats (PDB, mmCIF, XML).

   PDB-101: Learn: Guide to Understanding PDB Data: PDB Overview

   pdb101.rcsb.org/learn/guide-to-understanding-pdb-data/pdb-overview

   查看此問題的所有搜尋結果

   What is a PDB archive?

   • The PDB archive is a repository of atomic coordinates and other information describing proteins and other important biological macromolecules. Structural biologists use methods such as X-ray crystallography, NMR spectroscopy, and cryo-electron microscopy to determine the location of each atom relative to each other in the molecule.

   PDB-101: Learn: Guide to Understanding PDB Data: PDB Overview

   pdb101.rcsb.org/learn/guide-to-understanding-pdb-data/pdb-overview

   查看此問題的所有搜尋結果

   How do I find a structure in a PDB archive?

   • When you start exploring the structures in the PDB archive, you will need to know a few things about the coordinate files. In a typical entry, you will find a diverse mixture of biological molecules, small molecules, ions, and water. Often, you can use the names and chain IDs to help sort these out.

   PDB-101: Learn: Guide to Understanding PDB Data: PDB Overview

   pdb101.rcsb.org/learn/guide-to-understanding-pdb-data/pdb-overview

   查看此問題的所有搜尋結果

   How do I run a search on the RCSB PDB site?

   • Many pages on the RCSB PDB site contain links to launch searches. For example, from the Structure Summary page, each listed author contains a link to the search page. Clicking that link will run a search for all structures for which that author is listed as the audit author. Searches can be saved and run later using the MyPDB feature.

   Overview: Search and Browse - RCSB PDB

   www.rcsb.org/docs/search-and-browse/overview-search-and-browse

   查看此問題的所有搜尋結果

4. www.rcsb.org › docs › search-and-browseOverview: Search and Browse - RCSB PDB

   www.rcsb.org › docs › search-and-browse

   • 網頁紀錄

   • Search
   • Browse
   • Query Results
   • Query by Example
   • Mypdb

   Specific information about the molecule(s) of interest can be used to query the 3D structure archive (including experimental structures and CSMs). Basic and advanced search options are available to search 3D structures available from RCSB.org. 1. Basic Searchcan be run from any page on the RCSB PDB Website by simply typing a search term or a protei...

   在「rcsb.org」查看更多資訊

   Currently groups of experimental structures are organized and classified in various ways so that users may explore them based on their specific classifications using the Browse Annotationsfeature. For example, you may navigate through the archive using any one of several classification hierarchies, such as SCOP or GO (Gene Ontology), EC (Enzyme cla...

   在「rcsb.org」查看更多資訊

   Once a search query has been executed using either Basic Search, Advanced Search Query Builder, or the Browse options, the search results can be listed, sorted, grouped and/or further refined using the 'Refinements' panel. The Advanced Search Query Builder displayed at the top of the search results page allows users to include additional search cri...

   在「rcsb.org」查看更多資訊

   Many pages on the RCSB PDB site contain links to launch searches. For example, from the Structure Summary page, each listed author contains a link to the search page. Clicking that link will run a search for all structures for which that author is listed as the audit author.

   在「rcsb.org」查看更多資訊

   Searches can be saved and run later using the MyPDB feature. MyPDB also allows you to schedule weekly email notifications of newly released structures that match a given search query. See the MyPDB documentationfor more details.

   在「rcsb.org」查看更多資訊

5. www.dxy.cn › bbs › newweb【下载】在电脑上看.pdb书的软件“LookPDB” - 丁香园论坛簡

   www.dxy.cn › bbs › newweb

   我忘了是从哪里搞到的这个东东，可以在普通电脑上看.pdb的书，适合没有PDA的朋友，也适合原创.pdb书的朋友检查电子书的质量。.

6. www.nakb.org › downloadDownloads - NAKB

   www.nakb.org › download

   • 網頁紀錄

   4 天前 · Complete current list of structures indexed by NAKB, with mappings to PDB and NDB ids, polymer composition, and abbreviated experimental method. NAKB's primary index is the PDB id for all PDB entries. The NDB id is only used as primary index id for NDB-only entries.

7. pdb101.rcsb.org › learn › guide-to-understanding-pdb-dataPDB-101: Learn: Guide to Understanding PDB Data: PDB Overview

   pdb101.rcsb.org › learn › guide-to-understanding-pdb-data

   • 網頁紀錄

   These files are available in several formats (PDB, mmCIF, XML). A typical PDB formatted file includes a large "header" section of text that summarizes the protein, citation information, and the details of the structure solution, followed by the sequence and a long list of the atoms and their coordinates.

8. mybiosoftware.com › quicklookpdb-quicklook-plugin-displayingQuickLookPDB – QuickLook plugin for Displaying PDB Files

   mybiosoftware.com › quicklookpdb-quicklook-plugin-displaying

   • 網頁紀錄

   QuickLookPDB is the QuickLook plugin for displaying PDB files and provides two visualisation options. plugin can use pymol to quickly render thumbnail images, while the heart of the plugin lies with the integration of a HTML-5 PDB viewer, Jolecule.